Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp5Q9D7S9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Chmp5Q9D7S9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Gm30025-201ENSMUST00000218555 728 ntBASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Gm10812-201ENSMUST00000099864 546 ntBASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp5Q9D7S9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.89■□□□□ 0.78
Chmp5Q9D7S9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Chmp5Q9D7S9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chmp5Q9D7S9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chmp5Q9D7S9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp5Q9D7S9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp5Q9D7S9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Chmp5Q9D7S9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.89■□□□□ 0.77
Chmp5Q9D7S9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp5Q9D7S9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp5Q9D7S9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp5Q9D7S9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp5Q9D7S9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Chmp5Q9D7S9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp5Q9D7S9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp5Q9D7S9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Gm26039-201ENSMUST00000158152 144 ntBASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 BC037039-201ENSMUST00000192003 2205 ntBASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp5Q9D7S9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms