Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Gm19164-201ENSMUST00000210667 640 ntBASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 CT009713.10-202ENSMUST00000225734 696 ntBASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd1Q9D0E3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lysmd1Q9D0E3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Gm15198-201ENSMUST00000117283 177 ntBASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Gm27533-201ENSMUST00000183800 152 ntBASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Gm18049-201ENSMUST00000208909 581 ntBASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd1Q9D0E3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Gm37917-201ENSMUST00000194711 392 ntBASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Gm42693-201ENSMUST00000196779 631 ntBASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Gm42612-201ENSMUST00000197986 623 ntBASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Gm43170-201ENSMUST00000199827 612 ntBASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Gm3786-201ENSMUST00000202659 378 ntBASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd1Q9D0E3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Gm13392-201ENSMUST00000117708 150 ntBASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Gm5035-201ENSMUST00000215581 927 ntBASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd1Q9D0E3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd1Q9D0E3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms