Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Gm15546-201ENSMUST00000122095 826 ntBASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Gm8493-201ENSMUST00000196881 489 ntBASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn1Q9CWM4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn1Q9CWM4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Pfdn1Q9CWM4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn1Q9CWM4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn1Q9CWM4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn1Q9CWM4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn1Q9CWM4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn1Q9CWM4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn1Q9CWM4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn1Q9CWM4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn1Q9CWM4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pfdn1Q9CWM4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 App-207ENSMUST00000227737 2827 ntBASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pfdn1Q9CWM4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn1Q9CWM4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn1Q9CWM4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn1Q9CWM4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pfdn1Q9CWM4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn1Q9CWM4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn1Q9CWM4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn1Q9CWM4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn1Q9CWM4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn1Q9CWM4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pfdn1Q9CWM4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms