Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Mir449b-201ENSMUST00000104833 80 ntBASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Cldnd1Q9CQX5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cldnd1Q9CQX5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cldnd1Q9CQX5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Cldnd1Q9CQX5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cldnd1Q9CQX5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cldnd1Q9CQX5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cldnd1Q9CQX5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.21■□□□□ 0.18
Cldnd1Q9CQX5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Cldnd1Q9CQX5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Gm7774-201ENSMUST00000200064 533 ntBASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Gm20553-201ENSMUST00000204205 844 ntBASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldnd1Q9CQX5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldnd1Q9CQX5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms