Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tpgs1Q99MS8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpgs1Q99MS8 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.54■□□□□ 0.24
Tpgs1Q99MS8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpgs1Q99MS8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpgs1Q99MS8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpgs1Q99MS8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpgs1Q99MS8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpgs1Q99MS8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tpgs1Q99MS8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Tpgs1Q99MS8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Gm6296-201ENSMUST00000222599 943 ntBASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tpgs1Q99MS8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Gm11780-201ENSMUST00000136880 516 ntBASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tpgs1Q99MS8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tpgs1Q99MS8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tpgs1Q99MS8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Tpgs1Q99MS8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.52■□□□□ 0.23
Tpgs1Q99MS8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tpgs1Q99MS8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tpgs1Q99MS8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Mir8098-201ENSMUST00000184011 137 ntBASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpgs1Q99MS8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms