Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd1Q99J36 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd1Q99J36 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Thumpd1Q99J36 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Thumpd1Q99J36 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Gm13474-201ENSMUST00000122466 815 ntBASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.18□□□□□ -0.14
Thumpd1Q99J36 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thumpd1Q99J36 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Gm21814-202ENSMUST00000203277 873 ntBASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thumpd1Q99J36 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms