Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga6Q91XY2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Gm27628-201ENSMUST00000184911 107 ntBASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga6Q91XY2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga6Q91XY2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Gm7222-201ENSMUST00000117512 906 ntBASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Gm11025-201ENSMUST00000140773 466 ntBASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Gm7506-201ENSMUST00000207758 815 ntBASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga6Q91XY2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Pcdhga6Q91XY2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms