Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Mir5122-201ENSMUST00000175004 89 ntBASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.35■□□□□ 0.05
Pcdh18Q8VHR0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh18Q8VHR0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh18Q8VHR0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh18Q8VHR0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh18Q8VHR0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh18Q8VHR0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms