Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssx2ipQ8VC66 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ssx2ipQ8VC66 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ssx2ipQ8VC66 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ssx2ipQ8VC66 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ssx2ipQ8VC66 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
Ssx2ipQ8VC66 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.33■□□□□ 0.21
Ssx2ipQ8VC66 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ssx2ipQ8VC66 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Mir770-201ENSMUST00000103252 94 ntBASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ssx2ipQ8VC66 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Gm45328-201ENSMUST00000210942 917 ntBASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx2ipQ8VC66 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Gm11950-201ENSMUST00000121615 838 ntBASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx2ipQ8VC66 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx2ipQ8VC66 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms