Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Mir770-201ENSMUST00000103252 94 ntBASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps39Q8R5L3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Vps39Q8R5L3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Gm6623-201ENSMUST00000173570 544 ntBASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps39Q8R5L3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vps39Q8R5L3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms