Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c5Q8R2T8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Gtf3c5Q8R2T8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c5Q8R2T8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c5Q8R2T8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c5Q8R2T8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gtf3c5Q8R2T8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c5Q8R2T8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c5Q8R2T8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c5Q8R2T8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c5Q8R2T8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.64■□□□□ 0.58
Gtf3c5Q8R2T8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gtf3c5Q8R2T8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c5Q8R2T8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Gtf3c5Q8R2T8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c5Q8R2T8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c5Q8R2T8 Gm38273-201ENSMUST00000194987 2382 ntBASIC18.62■□□□□ 0.57
Gtf3c5Q8R2T8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c5Q8R2T8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms