Protein–RNA interactions for Protein: Q8QZY9

Sf3b4, Splicing factor 3B subunit 4, mousemouse

Known RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b4Q8QZY9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sf3b4Q8QZY9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
Sf3b4Q8QZY9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3b4Q8QZY9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.83□□□□□ -0.03
Sf3b4Q8QZY9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b4Q8QZY9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b4Q8QZY9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b4Q8QZY9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b4Q8QZY9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Sf3b4Q8QZY9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Mir3081-201ENSMUST00000175305 84 ntBASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Gm29707-201ENSMUST00000196325 491 ntBASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b4Q8QZY9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Gm27357-201ENSMUST00000183754 135 ntBASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms