Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Gm12644-201ENSMUST00000119935 606 ntBASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a1Q8K4Z5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Birc2-201ENSMUST00000054878 378 ntBASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a1Q8K4Z5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Sf3a1Q8K4Z5 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a1Q8K4Z5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a1Q8K4Z5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms