Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 AC135669.1-201ENSMUST00000213585 412 ntBASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Gm10154-201ENSMUST00000084445 354 ntBASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Gm6973-201ENSMUST00000117080 721 ntBASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col23a1Q8K4G2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Gm18187-201ENSMUST00000196476 984 ntBASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Gm9794-201ENSMUST00000202370 423 ntBASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Gm15222-202ENSMUST00000228667 1726 ntBASIC19.17■□□□□ 0.66
Col23a1Q8K4G2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col23a1Q8K4G2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Gm12490-201ENSMUST00000120255 560 ntBASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.15■□□□□ 0.66
Col23a1Q8K4G2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.14■□□□□ 0.66
Col23a1Q8K4G2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms