Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Clrn1Q8K445 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.02■□□□□ -0
Clrn1Q8K445 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.02■□□□□ -0
Clrn1Q8K445 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.02■□□□□ -0
Clrn1Q8K445 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clrn1Q8K445 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn1Q8K445 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn1Q8K445 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn1Q8K445 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn1Q8K445 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Clrn1Q8K445 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn1Q8K445 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn1Q8K445 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Clrn1Q8K445 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn1Q8K445 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn1Q8K445 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Clrn1Q8K445 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.01□□□□□ -0.01
Clrn1Q8K445 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Gm13312-201ENSMUST00000119631 718 ntBASIC15.01□□□□□ -0.01
Clrn1Q8K445 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn1Q8K445 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clrn1Q8K445 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15□□□□□ -0.01
Clrn1Q8K445 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15□□□□□ -0.01
Clrn1Q8K445 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clrn1Q8K445 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clrn1Q8K445 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clrn1Q8K445 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clrn1Q8K445 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clrn1Q8K445 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15□□□□□ -0.01
Clrn1Q8K445 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Clrn1Q8K445 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15□□□□□ -0.01
Clrn1Q8K445 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clrn1Q8K445 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clrn1Q8K445 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clrn1Q8K445 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15□□□□□ -0.01
Clrn1Q8K445 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15□□□□□ -0.01
Clrn1Q8K445 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clrn1Q8K445 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15□□□□□ -0.01
Clrn1Q8K445 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clrn1Q8K445 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15□□□□□ -0.01
Clrn1Q8K445 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clrn1Q8K445 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.99□□□□□ -0.01
Clrn1Q8K445 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Rprl3-201ENSMUST00000157400 290 ntBASIC14.99□□□□□ -0.01
Clrn1Q8K445 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Mir3081-201ENSMUST00000175305 84 ntBASIC14.99□□□□□ -0.01
Clrn1Q8K445 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.99□□□□□ -0.01
Clrn1Q8K445 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clrn1Q8K445 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms