Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Gm10052-201ENSMUST00000168019 960 ntBASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Gm7729-201ENSMUST00000050143 801 ntBASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgcs1Q8JZK9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hmgcs1Q8JZK9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hmgcs1Q8JZK9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Mir770-201ENSMUST00000103252 94 ntBASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Gm10231-201ENSMUST00000181584 441 ntBASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Gm10175-202ENSMUST00000208752 441 ntBASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgcs1Q8JZK9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Gm44430-201ENSMUST00000203376 995 ntBASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hmgcs1Q8JZK9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hmgcs1Q8JZK9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms