Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rp1l1Q8CGM2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Gm2810-201ENSMUST00000118681 990 ntBASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Gm17837-201ENSMUST00000186435 985 ntBASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rp1l1Q8CGM2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Gm27430-201ENSMUST00000184585 107 ntBASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Gm44333-201ENSMUST00000197168 107 ntBASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rp1l1Q8CGM2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Gm6415-201ENSMUST00000118488 348 ntBASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rp1l1Q8CGM2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rp1l1Q8CGM2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms