Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Gm15590-201ENSMUST00000078419 552 ntBASIC19.54■□□□□ 0.72
Smc4Q8CG47 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.53■□□□□ 0.72
Smc4Q8CG47 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc4Q8CG47 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.52■□□□□ 0.72
Smc4Q8CG47 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc4Q8CG47 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc4Q8CG47 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Smc4Q8CG47 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc4Q8CG47 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smc4Q8CG47 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc4Q8CG47 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Smc4Q8CG47 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.52■□□□□ 0.72
Smc4Q8CG47 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.52■□□□□ 0.72
Smc4Q8CG47 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.52■□□□□ 0.72
Smc4Q8CG47 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc4Q8CG47 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Smc4Q8CG47 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.52■□□□□ 0.72
Smc4Q8CG47 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc4Q8CG47 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc4Q8CG47 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Smc4Q8CG47 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc4Q8CG47 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc4Q8CG47 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc4Q8CG47 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Smc4Q8CG47 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc4Q8CG47 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc4Q8CG47 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc4Q8CG47 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc4Q8CG47 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smc4Q8CG47 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.51■□□□□ 0.71
Smc4Q8CG47 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Gm27646-201ENSMUST00000183989 110 ntBASIC19.51■□□□□ 0.71
Smc4Q8CG47 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc4Q8CG47 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.51■□□□□ 0.71
Smc4Q8CG47 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Gm19164-201ENSMUST00000210667 640 ntBASIC19.5■□□□□ 0.71
Smc4Q8CG47 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.5■□□□□ 0.71
Smc4Q8CG47 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.5■□□□□ 0.71
Smc4Q8CG47 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Haglr-201ENSMUST00000100000 2085 ntBASIC19.5■□□□□ 0.71
Smc4Q8CG47 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc4Q8CG47 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms