Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Mir3081-201ENSMUST00000175305 84 ntBASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Ank2-226ENSMUST00000189368 339 ntBASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ppp4r4Q8C0Y0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ppp4r4Q8C0Y0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ppp4r4Q8C0Y0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ppp4r4Q8C0Y0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ppp4r4Q8C0Y0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Sybu-209ENSMUST00000228639 4113 ntBASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ppp4r4Q8C0Y0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm44430-201ENSMUST00000203376 995 ntBASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ppp4r4Q8C0Y0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ppp4r4Q8C0Y0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms