Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scfd1Q8BRF7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Scfd1Q8BRF7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Gm4899-201ENSMUST00000178708 719 ntBASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Gm2213-201ENSMUST00000197485 688 ntBASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scfd1Q8BRF7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Scfd1Q8BRF7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Scfd1Q8BRF7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms