Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn3bQ8BHK2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Gm36967-201ENSMUST00000193814 266 ntBASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn3bQ8BHK2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Gm13186-201ENSMUST00000118031 316 ntBASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3bQ8BHK2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Gm18115-201ENSMUST00000221209 621 ntBASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3bQ8BHK2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms