Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Mir5122-201ENSMUST00000175004 89 ntBASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 App-207ENSMUST00000227737 2827 ntBASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim6Q8BGE7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim6Q8BGE7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Gm18421-201ENSMUST00000204122 625 ntBASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim6Q8BGE7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim6Q8BGE7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms