Protein–RNA interactions for Protein: Q8BFX1

Rnf187, E3 ubiquitin-protein ligase RNF187, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf187Q8BFX1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf187Q8BFX1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf187Q8BFX1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf187Q8BFX1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf187Q8BFX1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf187Q8BFX1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf187Q8BFX1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf187Q8BFX1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf187Q8BFX1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf187Q8BFX1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms