Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Mir5122-201ENSMUST00000175004 89 ntBASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Gm2274-201ENSMUST00000184539 609 ntBASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bQ80YF6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bQ80YF6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Upk3bQ80YF6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bQ80YF6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bQ80YF6 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.46□□□□□ -0.26
Upk3bQ80YF6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bQ80YF6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bQ80YF6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bQ80YF6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bQ80YF6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Gm8520-201ENSMUST00000186517 868 ntBASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Gm7213-201ENSMUST00000215977 950 ntBASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bQ80YF6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms