Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ush1gQ80T11 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Gm13036-201ENSMUST00000117799 748 ntBASIC17.36■□□□□ 0.37
Ush1gQ80T11 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.36■□□□□ 0.37
Ush1gQ80T11 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.36■□□□□ 0.37
Ush1gQ80T11 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1gQ80T11 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Gm23935-201ENSMUST00000102303 57 ntBASIC17.35■□□□□ 0.37
Ush1gQ80T11 Gm24270-201ENSMUST00000102326 57 ntBASIC17.35■□□□□ 0.37
Ush1gQ80T11 Gm24245-201ENSMUST00000157318 57 ntBASIC17.35■□□□□ 0.37
Ush1gQ80T11 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ush1gQ80T11 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.35■□□□□ 0.37
Ush1gQ80T11 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1gQ80T11 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Gm11780-201ENSMUST00000136880 516 ntBASIC17.34■□□□□ 0.37
Ush1gQ80T11 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.34■□□□□ 0.37
Ush1gQ80T11 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.34■□□□□ 0.37
Ush1gQ80T11 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ush1gQ80T11 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1gQ80T11 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1gQ80T11 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1gQ80T11 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1gQ80T11 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Ush1gQ80T11 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.33■□□□□ 0.36
Ush1gQ80T11 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.33■□□□□ 0.36
Ush1gQ80T11 Gm14822-201ENSMUST00000122247 291 ntBASIC17.33■□□□□ 0.36
Ush1gQ80T11 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ush1gQ80T11 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms