Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Ift88Q61371 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.62■□□□□ 0.41
Ift88Q61371 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.62■□□□□ 0.41
Ift88Q61371 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.62■□□□□ 0.41
Ift88Q61371 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ift88Q61371 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ift88Q61371 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.61■□□□□ 0.41
Ift88Q61371 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.61■□□□□ 0.41
Ift88Q61371 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.61■□□□□ 0.41
Ift88Q61371 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ift88Q61371 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Gm37722-201ENSMUST00000193757 208 ntBASIC17.61■□□□□ 0.41
Ift88Q61371 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.61■□□□□ 0.41
Ift88Q61371 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ift88Q61371 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ift88Q61371 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.6■□□□□ 0.41
Ift88Q61371 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.6■□□□□ 0.41
Ift88Q61371 Gm27389-201ENSMUST00000183622 195 ntBASIC17.6■□□□□ 0.41
Ift88Q61371 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ift88Q61371 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ift88Q61371 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ift88Q61371 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ift88Q61371 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ift88Q61371 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ift88Q61371 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.59■□□□□ 0.41
Ift88Q61371 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.59■□□□□ 0.41
Ift88Q61371 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ift88Q61371 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ift88Q61371 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ift88Q61371 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ift88Q61371 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.59■□□□□ 0.41
Ift88Q61371 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ift88Q61371 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ift88Q61371 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ift88Q61371 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ift88Q61371 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.58■□□□□ 0.41
Ift88Q61371 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ift88Q61371 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.58■□□□□ 0.41
Ift88Q61371 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ift88Q61371 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Ift88Q61371 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Ift88Q61371 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ift88Q61371 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ift88Q61371 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ift88Q61371 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ift88Q61371 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ift88Q61371 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ift88Q61371 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Ift88Q61371 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ift88Q61371 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ift88Q61371 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms