Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six4Q61321 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six4Q61321 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six4Q61321 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Six4Q61321 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.03■□□□□ 0.16
Six4Q61321 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six4Q61321 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.03■□□□□ 0.16
Six4Q61321 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.03■□□□□ 0.16
Six4Q61321 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six4Q61321 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Six4Q61321 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six4Q61321 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six4Q61321 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Six4Q61321 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Six4Q61321 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Six4Q61321 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Six4Q61321 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six4Q61321 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six4Q61321 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Six4Q61321 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six4Q61321 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six4Q61321 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six4Q61321 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Six4Q61321 App-207ENSMUST00000227737 2827 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six4Q61321 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Six4Q61321 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.02■□□□□ 0.16
Six4Q61321 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
Six4Q61321 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.02■□□□□ 0.16
Six4Q61321 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.02■□□□□ 0.16
Six4Q61321 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Six4Q61321 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm8825-201ENSMUST00000182565 998 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm4518-201ENSMUST00000182638 718 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm27459-201ENSMUST00000184860 107 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.02■□□□□ 0.16
Six4Q61321 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six4Q61321 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six4Q61321 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six4Q61321 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Six4Q61321 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.02■□□□□ 0.16
Six4Q61321 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six4Q61321 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Six4Q61321 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Six4Q61321 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Six4Q61321 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Six4Q61321 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Six4Q61321 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Six4Q61321 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Six4Q61321 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Six4Q61321 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Six4Q61321 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.01■□□□□ 0.15
Six4Q61321 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.01■□□□□ 0.15
Six4Q61321 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Gm43347-201ENSMUST00000200226 580 ntBASIC16.01■□□□□ 0.15
Six4Q61321 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.01■□□□□ 0.15
Six4Q61321 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Six4Q61321 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six4Q61321 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Six4Q61321 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Six4Q61321 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Six4Q61321 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Six4Q61321 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Six4Q61321 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Six4Q61321 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Six4Q61321 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Six4Q61321 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Six4Q61321 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16■□□□□ 0.15
Six4Q61321 Gm12497-201ENSMUST00000138778 237 ntBASIC16■□□□□ 0.15
Six4Q61321 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16■□□□□ 0.15
Six4Q61321 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Six4Q61321 Gm44357-201ENSMUST00000195897 142 ntBASIC16■□□□□ 0.15
Six4Q61321 Gm19658-201ENSMUST00000196231 138 ntBASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms