Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cln3Q61124 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln3Q61124 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln3Q61124 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Cln3Q61124 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.35■□□□□ 0.37
Cln3Q61124 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cln3Q61124 Gm27494-201ENSMUST00000184735 189 ntBASIC17.35■□□□□ 0.37
Cln3Q61124 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.35■□□□□ 0.37
Cln3Q61124 Gm7063-201ENSMUST00000186840 981 ntBASIC17.35■□□□□ 0.37
Cln3Q61124 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln3Q61124 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln3Q61124 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln3Q61124 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln3Q61124 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln3Q61124 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cln3Q61124 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cln3Q61124 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln3Q61124 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln3Q61124 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cln3Q61124 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cln3Q61124 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.34■□□□□ 0.37
Cln3Q61124 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cln3Q61124 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cln3Q61124 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.34■□□□□ 0.37
Cln3Q61124 Gm11025-201ENSMUST00000140773 466 ntBASIC17.34■□□□□ 0.37
Cln3Q61124 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cln3Q61124 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cln3Q61124 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cln3Q61124 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cln3Q61124 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.34■□□□□ 0.37
Cln3Q61124 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.34■□□□□ 0.37
Cln3Q61124 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.34■□□□□ 0.37
Cln3Q61124 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.34■□□□□ 0.37
Cln3Q61124 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Cln3Q61124 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cln3Q61124 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cln3Q61124 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cln3Q61124 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cln3Q61124 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cln3Q61124 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cln3Q61124 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cln3Q61124 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cln3Q61124 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cln3Q61124 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cln3Q61124 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Cln3Q61124 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cln3Q61124 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
Cln3Q61124 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Cln3Q61124 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cln3Q61124 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cln3Q61124 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cln3Q61124 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cln3Q61124 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cln3Q61124 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Cln3Q61124 Gm15427-201ENSMUST00000117288 531 ntBASIC17.33■□□□□ 0.36
Cln3Q61124 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.33■□□□□ 0.36
Cln3Q61124 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.33■□□□□ 0.36
Cln3Q61124 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cln3Q61124 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.33■□□□□ 0.36
Cln3Q61124 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.33■□□□□ 0.36
Cln3Q61124 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
Cln3Q61124 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cln3Q61124 Haglr-201ENSMUST00000100000 2085 ntBASIC17.33■□□□□ 0.36
Cln3Q61124 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cln3Q61124 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cln3Q61124 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cln3Q61124 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cln3Q61124 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Gm13365-201ENSMUST00000121188 973 ntBASIC17.32■□□□□ 0.36
Cln3Q61124 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.32■□□□□ 0.36
Cln3Q61124 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.32■□□□□ 0.36
Cln3Q61124 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.32■□□□□ 0.36
Cln3Q61124 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.32■□□□□ 0.36
Cln3Q61124 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln3Q61124 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln3Q61124 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln3Q61124 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln3Q61124 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln3Q61124 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln3Q61124 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln3Q61124 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln3Q61124 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms