Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Nr1h4Q60641 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nr1h4Q60641 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nr1h4Q60641 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nr1h4Q60641 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.16■□□□□ 0.02
Nr1h4Q60641 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Nr1h4Q60641 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1h4Q60641 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.15■□□□□ 0.02
Nr1h4Q60641 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.15■□□□□ 0.02
Nr1h4Q60641 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.15■□□□□ 0.02
Nr1h4Q60641 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.15■□□□□ 0.02
Nr1h4Q60641 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.15■□□□□ 0.02
Nr1h4Q60641 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1h4Q60641 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Gm7213-201ENSMUST00000215977 950 ntBASIC15.14■□□□□ 0.01
Nr1h4Q60641 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1h4Q60641 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nr1h4Q60641 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms