Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-1Q5R1I8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-1Q5R1I8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.77□□□□□ -0.68
Trav3-1Q5R1I8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-1Q5R1I8 Matn2-206ENSMUST00000228570 2798 ntBASIC10.77□□□□□ -0.68
Trav3-1Q5R1I8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Trav3-1Q5R1I8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-1Q5R1I8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-1Q5R1I8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-1Q5R1I8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3-1Q5R1I8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Gm6085-201ENSMUST00000182774 1470 ntBASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3-1Q5R1I8 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3-1Q5R1I8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms