Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl5Q3UTQ8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl5Q3UTQ8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Gm25406-201ENSMUST00000157599 105 ntBASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Gm44454-201ENSMUST00000198541 138 ntBASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdkl5Q3UTQ8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl5Q3UTQ8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cdkl5Q3UTQ8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdkl5Q3UTQ8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdkl5Q3UTQ8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Gm27357-201ENSMUST00000183754 135 ntBASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl5Q3UTQ8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.38■□□□□ 0.53
Cdkl5Q3UTQ8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms