Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc190Q3URK1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc190Q3URK1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc190Q3URK1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc190Q3URK1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc190Q3URK1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc190Q3URK1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc190Q3URK1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc190Q3URK1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Gm18958-201ENSMUST00000174258 762 ntBASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Gm7791-201ENSMUST00000219066 539 ntBASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc190Q3URK1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Gm27000-201ENSMUST00000182943 842 ntBASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Gm27463-201ENSMUST00000183569 57 ntBASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.01□□□□□ -0.17
Ccdc190Q3URK1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc190Q3URK1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc190Q3URK1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc190Q3URK1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc190Q3URK1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc190Q3URK1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc190Q3URK1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc190Q3URK1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc190Q3URK1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc190Q3URK1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc190Q3URK1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc190Q3URK1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc190Q3URK1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc190Q3URK1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms