Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.14■□□□□ 0.33
Snx27Q3UHD6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.14■□□□□ 0.33
Snx27Q3UHD6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx27Q3UHD6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Snx27Q3UHD6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx27Q3UHD6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx27Q3UHD6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snx27Q3UHD6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snx27Q3UHD6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx27Q3UHD6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.14■□□□□ 0.33
Snx27Q3UHD6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snx27Q3UHD6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Gm37153-201ENSMUST00000193637 231 ntBASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Gm19164-201ENSMUST00000210667 640 ntBASIC17.13■□□□□ 0.33
Snx27Q3UHD6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snx27Q3UHD6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.12■□□□□ 0.33
Snx27Q3UHD6 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.12■□□□□ 0.33
Snx27Q3UHD6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.11■□□□□ 0.33
Snx27Q3UHD6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx27Q3UHD6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx27Q3UHD6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx27Q3UHD6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx27Q3UHD6 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.11■□□□□ 0.33
Snx27Q3UHD6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx27Q3UHD6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx27Q3UHD6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snx27Q3UHD6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx27Q3UHD6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx27Q3UHD6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx27Q3UHD6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snx27Q3UHD6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Snx27Q3UHD6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Gm15467-201ENSMUST00000120582 445 ntBASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Gm12260-201ENSMUST00000122447 411 ntBASIC17.09■□□□□ 0.33
Snx27Q3UHD6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Snx27Q3UHD6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms