Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SgcaP82350 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.36□□□□□ -0.27
SgcaP82350 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.36□□□□□ -0.27
SgcaP82350 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.36□□□□□ -0.27
SgcaP82350 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.36□□□□□ -0.27
SgcaP82350 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SgcaP82350 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.36□□□□□ -0.27
SgcaP82350 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SgcaP82350 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcaP82350 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SgcaP82350 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SgcaP82350 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SgcaP82350 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SgcaP82350 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SgcaP82350 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SgcaP82350 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.35□□□□□ -0.27
SgcaP82350 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.35□□□□□ -0.27
SgcaP82350 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.35□□□□□ -0.27
SgcaP82350 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SgcaP82350 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SgcaP82350 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SgcaP82350 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SgcaP82350 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.35□□□□□ -0.27
SgcaP82350 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.35□□□□□ -0.27
SgcaP82350 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SgcaP82350 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.34□□□□□ -0.27
SgcaP82350 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SgcaP82350 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SgcaP82350 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SgcaP82350 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
SgcaP82350 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.34□□□□□ -0.27
SgcaP82350 Gm43183-201ENSMUST00000200632 547 ntBASIC13.34□□□□□ -0.27
SgcaP82350 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.34□□□□□ -0.27
SgcaP82350 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.34□□□□□ -0.27
SgcaP82350 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SgcaP82350 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SgcaP82350 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms