Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.2■□□□□ 0.34
CiitaP79621 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CiitaP79621 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CiitaP79621 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CiitaP79621 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.2■□□□□ 0.34
CiitaP79621 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CiitaP79621 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CiitaP79621 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CiitaP79621 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CiitaP79621 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.19■□□□□ 0.34
CiitaP79621 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CiitaP79621 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CiitaP79621 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.19■□□□□ 0.34
CiitaP79621 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
CiitaP79621 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CiitaP79621 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CiitaP79621 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Gm7222-201ENSMUST00000117512 906 ntBASIC17.18■□□□□ 0.34
CiitaP79621 Gm8344-201ENSMUST00000119813 856 ntBASIC17.18■□□□□ 0.34
CiitaP79621 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.18■□□□□ 0.34
CiitaP79621 Gm27525-201ENSMUST00000184465 107 ntBASIC17.18■□□□□ 0.34
CiitaP79621 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CiitaP79621 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CiitaP79621 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CiitaP79621 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.17■□□□□ 0.34
CiitaP79621 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.17■□□□□ 0.34
CiitaP79621 Gm5682-201ENSMUST00000173402 505 ntBASIC17.17■□□□□ 0.34
CiitaP79621 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
CiitaP79621 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Gm15590-201ENSMUST00000078419 552 ntBASIC17.17■□□□□ 0.34
CiitaP79621 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CiitaP79621 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CiitaP79621 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CiitaP79621 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CiitaP79621 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiitaP79621 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CiitaP79621 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CiitaP79621 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiitaP79621 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiitaP79621 Gm13036-201ENSMUST00000117799 748 ntBASIC17.16■□□□□ 0.34
CiitaP79621 Gm15358-201ENSMUST00000119249 520 ntBASIC17.16■□□□□ 0.34
CiitaP79621 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiitaP79621 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.16■□□□□ 0.34
CiitaP79621 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiitaP79621 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.16■□□□□ 0.34
CiitaP79621 Gm18206-201ENSMUST00000207027 926 ntBASIC17.16■□□□□ 0.34
CiitaP79621 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.16■□□□□ 0.34
CiitaP79621 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiitaP79621 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiitaP79621 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.16■□□□□ 0.34
CiitaP79621 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CiitaP79621 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.16■□□□□ 0.34
CiitaP79621 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiitaP79621 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CiitaP79621 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.16■□□□□ 0.34
CiitaP79621 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CiitaP79621 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms