Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Six5P70178 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.89□□□□□ -0.03
Six5P70178 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.89□□□□□ -0.03
Six5P70178 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Six5P70178 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.88□□□□□ -0.03
Six5P70178 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Six5P70178 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.88□□□□□ -0.03
Six5P70178 Gm25406-201ENSMUST00000157599 105 ntBASIC14.88□□□□□ -0.03
Six5P70178 Gm17807-201ENSMUST00000186869 298 ntBASIC14.88□□□□□ -0.03
Six5P70178 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Six5P70178 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Six5P70178 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.88□□□□□ -0.03
Six5P70178 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Six5P70178 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.87□□□□□ -0.03
Six5P70178 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Six5P70178 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.87□□□□□ -0.03
Six5P70178 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Six5P70178 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Six5P70178 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Six5P70178 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.87□□□□□ -0.03
Six5P70178 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.87□□□□□ -0.03
Six5P70178 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.87□□□□□ -0.03
Six5P70178 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Six5P70178 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Six5P70178 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Six5P70178 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.86□□□□□ -0.03
Six5P70178 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.86□□□□□ -0.03
Six5P70178 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.86□□□□□ -0.03
Six5P70178 Gm6257-201ENSMUST00000163864 910 ntBASIC14.86□□□□□ -0.03
Six5P70178 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Gm9172-201ENSMUST00000212092 954 ntBASIC14.86□□□□□ -0.03
Six5P70178 Gm18669-201ENSMUST00000216049 778 ntBASIC14.86□□□□□ -0.03
Six5P70178 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.86□□□□□ -0.03
Six5P70178 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.86□□□□□ -0.03
Six5P70178 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Six5P70178 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Six5P70178 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Six5P70178 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six5P70178 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Six5P70178 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six5P70178 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Six5P70178 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Six5P70178 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six5P70178 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six5P70178 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six5P70178 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six5P70178 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six5P70178 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six5P70178 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Six5P70178 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms