Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b6P59708 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Sf3b6P59708 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.13□□□□□ -0.15
Sf3b6P59708 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.13□□□□□ -0.15
Sf3b6P59708 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3b6P59708 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3b6P59708 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.13□□□□□ -0.15
Sf3b6P59708 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Sf3b6P59708 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b6P59708 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3b6P59708 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.12□□□□□ -0.15
Sf3b6P59708 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sf3b6P59708 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Sf3b6P59708 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Sf3b6P59708 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sf3b6P59708 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Sf3b6P59708 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.12□□□□□ -0.15
Sf3b6P59708 Gm3375-201ENSMUST00000203929 796 ntBASIC14.12□□□□□ -0.15
Sf3b6P59708 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.12□□□□□ -0.15
Sf3b6P59708 Gm30025-201ENSMUST00000218555 728 ntBASIC14.12□□□□□ -0.15
Sf3b6P59708 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.12□□□□□ -0.15
Sf3b6P59708 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sf3b6P59708 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.12□□□□□ -0.15
Sf3b6P59708 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sf3b6P59708 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.12□□□□□ -0.15
Sf3b6P59708 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sf3b6P59708 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sf3b6P59708 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b6P59708 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sf3b6P59708 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.11□□□□□ -0.15
Sf3b6P59708 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sf3b6P59708 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sf3b6P59708 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.11□□□□□ -0.15
Sf3b6P59708 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Sf3b6P59708 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sf3b6P59708 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.11□□□□□ -0.15
Sf3b6P59708 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.11□□□□□ -0.15
Sf3b6P59708 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.11□□□□□ -0.15
Sf3b6P59708 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.11□□□□□ -0.15
Sf3b6P59708 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b6P59708 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.11□□□□□ -0.15
Sf3b6P59708 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sf3b6P59708 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sf3b6P59708 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.1□□□□□ -0.15
Sf3b6P59708 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b6P59708 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sf3b6P59708 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms