Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Slc6a1P31648 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.71□□□□□ -0.21
Slc6a1P31648 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.71□□□□□ -0.21
Slc6a1P31648 Mir5122-201ENSMUST00000175004 89 ntBASIC13.71□□□□□ -0.21
Slc6a1P31648 Gm43183-201ENSMUST00000200632 547 ntBASIC13.71□□□□□ -0.21
Slc6a1P31648 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.71□□□□□ -0.21
Slc6a1P31648 Odf3b-204ENSMUST00000227834 930 ntBASIC13.71□□□□□ -0.21
Slc6a1P31648 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.71□□□□□ -0.21
Slc6a1P31648 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Slc6a1P31648 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Slc6a1P31648 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Slc6a1P31648 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Slc6a1P31648 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Slc6a1P31648 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.7□□□□□ -0.22
Slc6a1P31648 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc6a1P31648 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc6a1P31648 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc6a1P31648 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Slc6a1P31648 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
Slc6a1P31648 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc6a1P31648 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a1P31648 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Slc6a1P31648 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Slc6a1P31648 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Slc6a1P31648 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.69□□□□□ -0.22
Slc6a1P31648 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.69□□□□□ -0.22
Slc6a1P31648 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.69□□□□□ -0.22
Slc6a1P31648 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Slc6a1P31648 Timm23-208ENSMUST00000226683 750 ntBASIC13.69□□□□□ -0.22
Slc6a1P31648 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Slc6a1P31648 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.69□□□□□ -0.22
Slc6a1P31648 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a1P31648 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Slc6a1P31648 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a1P31648 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms