Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.55■□□□□ 0.4
RarbP22605 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RarbP22605 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RarbP22605 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RarbP22605 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RarbP22605 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RarbP22605 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RarbP22605 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RarbP22605 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RarbP22605 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.54■□□□□ 0.4
RarbP22605 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RarbP22605 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.54■□□□□ 0.4
RarbP22605 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RarbP22605 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RarbP22605 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RarbP22605 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RarbP22605 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RarbP22605 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RarbP22605 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.54■□□□□ 0.4
RarbP22605 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RarbP22605 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.54■□□□□ 0.4
RarbP22605 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RarbP22605 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RarbP22605 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RarbP22605 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.53■□□□□ 0.4
RarbP22605 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.53■□□□□ 0.4
RarbP22605 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RarbP22605 Gm14057-201ENSMUST00000120631 482 ntBASIC17.53■□□□□ 0.4
RarbP22605 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.53■□□□□ 0.4
RarbP22605 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.53■□□□□ 0.4
RarbP22605 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RarbP22605 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RarbP22605 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.53■□□□□ 0.4
RarbP22605 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.53■□□□□ 0.4
RarbP22605 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RarbP22605 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RarbP22605 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.53■□□□□ 0.4
RarbP22605 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RarbP22605 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RarbP22605 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RarbP22605 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RarbP22605 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RarbP22605 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RarbP22605 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RarbP22605 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RarbP22605 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RarbP22605 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RarbP22605 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RarbP22605 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RarbP22605 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
RarbP22605 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RarbP22605 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RarbP22605 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RarbP22605 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RarbP22605 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RarbP22605 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RarbP22605 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RarbP22605 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.52■□□□□ 0.4
RarbP22605 Gm7787-201ENSMUST00000216858 688 ntBASIC17.52■□□□□ 0.4
RarbP22605 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.52■□□□□ 0.4
RarbP22605 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RarbP22605 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RarbP22605 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RarbP22605 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RarbP22605 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RarbP22605 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RarbP22605 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
RarbP22605 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RarbP22605 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RarbP22605 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RarbP22605 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RarbP22605 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RarbP22605 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.51■□□□□ 0.39
RarbP22605 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.51■□□□□ 0.39
RarbP22605 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.51■□□□□ 0.39
RarbP22605 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.51■□□□□ 0.39
RarbP22605 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.51■□□□□ 0.39
RarbP22605 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.51■□□□□ 0.39
RarbP22605 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RarbP22605 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.51■□□□□ 0.39
RarbP22605 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.51■□□□□ 0.39
RarbP22605 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.51■□□□□ 0.39
RarbP22605 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.51■□□□□ 0.39
RarbP22605 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.51■□□□□ 0.39
RarbP22605 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RarbP22605 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RarbP22605 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms