Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.49■□□□□ 0.55
Col1a1P11087 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Col1a1P11087 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col1a1P11087 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col1a1P11087 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col1a1P11087 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col1a1P11087 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col1a1P11087 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Col1a1P11087 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col1a1P11087 Gm23547-201ENSMUST00000158210 271 ntBASIC18.48■□□□□ 0.55
Col1a1P11087 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC18.48■□□□□ 0.55
Col1a1P11087 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.48■□□□□ 0.55
Col1a1P11087 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.48■□□□□ 0.55
Col1a1P11087 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Col1a1P11087 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.48■□□□□ 0.55
Col1a1P11087 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col1a1P11087 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Col1a1P11087 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col1a1P11087 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.48■□□□□ 0.55
Col1a1P11087 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col1a1P11087 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col1a1P11087 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.47■□□□□ 0.55
Col1a1P11087 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Gm16198-201ENSMUST00000118766 670 ntBASIC18.47■□□□□ 0.55
Col1a1P11087 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.47■□□□□ 0.55
Col1a1P11087 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.47■□□□□ 0.55
Col1a1P11087 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.47■□□□□ 0.55
Col1a1P11087 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.47■□□□□ 0.55
Col1a1P11087 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
Col1a1P11087 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.47■□□□□ 0.55
Col1a1P11087 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col1a1P11087 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Col1a1P11087 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.46■□□□□ 0.55
Col1a1P11087 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Col1a1P11087 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.46■□□□□ 0.55
Col1a1P11087 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.46■□□□□ 0.55
Col1a1P11087 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.46■□□□□ 0.55
Col1a1P11087 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Col1a1P11087 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Col1a1P11087 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col1a1P11087 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Col1a1P11087 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Col1a1P11087 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Col1a1P11087 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.46■□□□□ 0.54
Col1a1P11087 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Col1a1P11087 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.46■□□□□ 0.54
Col1a1P11087 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Col1a1P11087 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Col1a1P11087 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.54
Col1a1P11087 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Col1a1P11087 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Col1a1P11087 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Col1a1P11087 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Col1a1P11087 Gm12428-201ENSMUST00000119844 727 ntBASIC18.45■□□□□ 0.54
Col1a1P11087 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.45■□□□□ 0.54
Col1a1P11087 Gm18057-201ENSMUST00000208220 503 ntBASIC18.45■□□□□ 0.54
Col1a1P11087 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col1a1P11087 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Col1a1P11087 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col1a1P11087 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms