Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc9P09633 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxc9P09633 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Hoxc9P09633 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hoxc9P09633 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
Hoxc9P09633 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.52■□□□□ 0.87
Hoxc9P09633 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc9P09633 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc9P09633 Mir1895-201ENSMUST00000122615 79 ntBASIC20.51■□□□□ 0.87
Hoxc9P09633 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC20.51■□□□□ 0.87
Hoxc9P09633 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.51■□□□□ 0.87
Hoxc9P09633 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC20.51■□□□□ 0.87
Hoxc9P09633 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc9P09633 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc9P09633 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc9P09633 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc9P09633 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc9P09633 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxc9P09633 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc9P09633 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc9P09633 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc9P09633 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Hoxc9P09633 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc9P09633 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc9P09633 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Hoxc9P09633 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.5■□□□□ 0.87
Hoxc9P09633 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC20.5■□□□□ 0.87
Hoxc9P09633 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC20.5■□□□□ 0.87
Hoxc9P09633 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.5■□□□□ 0.87
Hoxc9P09633 Gm18246-201ENSMUST00000221023 728 ntBASIC20.5■□□□□ 0.87
Hoxc9P09633 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc9P09633 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc9P09633 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.5■□□□□ 0.87
Hoxc9P09633 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc9P09633 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc9P09633 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc9P09633 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxc9P09633 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hoxc9P09633 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.49■□□□□ 0.87
Hoxc9P09633 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Hoxc9P09633 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Hoxc9P09633 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC20.49■□□□□ 0.87
Hoxc9P09633 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC20.49■□□□□ 0.87
Hoxc9P09633 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hoxc9P09633 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.49■□□□□ 0.87
Hoxc9P09633 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Hoxc9P09633 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Hoxc9P09633 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxc9P09633 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Hoxc9P09633 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Hoxc9P09633 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc9P09633 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc9P09633 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc9P09633 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.48■□□□□ 0.87
Hoxc9P09633 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc9P09633 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc9P09633 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Hoxc9P09633 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc9P09633 Gm27301-201ENSMUST00000184012 127 ntBASIC20.48■□□□□ 0.87
Hoxc9P09633 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.48■□□□□ 0.87
Hoxc9P09633 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc9P09633 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc9P09633 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc9P09633 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc9P09633 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc9P09633 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.48■□□□□ 0.87
Hoxc9P09633 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxc9P09633 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Hoxc9P09633 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc9P09633 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Hoxc9P09633 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.47■□□□□ 0.87
Hoxc9P09633 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc9P09633 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.47■□□□□ 0.87
Hoxc9P09633 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc9P09633 Gm6226-201ENSMUST00000117765 1146 ntBASIC20.47■□□□□ 0.87
Hoxc9P09633 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.47■□□□□ 0.87
Hoxc9P09633 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc9P09633 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.47■□□□□ 0.87
Hoxc9P09633 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc9P09633 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Hoxc9P09633 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc9P09633 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc9P09633 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc9P09633 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc9P09633 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc9P09633 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxc9P09633 Gm13332-201ENSMUST00000120451 1398 ntBASIC20.46■□□□□ 0.87
Hoxc9P09633 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms