Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.66□□□□□ -0.22
H3f3cP02301 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
H3f3cP02301 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
H3f3cP02301 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
H3f3cP02301 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.65□□□□□ -0.22
H3f3cP02301 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
H3f3cP02301 Gm7367-201ENSMUST00000057611 492 ntBASIC13.65□□□□□ -0.22
H3f3cP02301 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.65□□□□□ -0.22
H3f3cP02301 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
H3f3cP02301 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
H3f3cP02301 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3f3cP02301 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
H3f3cP02301 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
H3f3cP02301 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.64□□□□□ -0.23
H3f3cP02301 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.64□□□□□ -0.23
H3f3cP02301 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.64□□□□□ -0.23
H3f3cP02301 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.64□□□□□ -0.23
H3f3cP02301 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.64□□□□□ -0.23
H3f3cP02301 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.64□□□□□ -0.23
H3f3cP02301 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.64□□□□□ -0.23
H3f3cP02301 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
H3f3cP02301 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.64□□□□□ -0.23
H3f3cP02301 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
H3f3cP02301 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
H3f3cP02301 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3f3cP02301 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.63□□□□□ -0.23
H3f3cP02301 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.63□□□□□ -0.23
H3f3cP02301 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
H3f3cP02301 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
H3f3cP02301 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.63□□□□□ -0.23
H3f3cP02301 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.63□□□□□ -0.23
H3f3cP02301 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
H3f3cP02301 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
H3f3cP02301 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
H3f3cP02301 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
H3f3cP02301 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Rprl3-201ENSMUST00000157400 290 ntBASIC13.63□□□□□ -0.23
H3f3cP02301 Mir3081-201ENSMUST00000175305 84 ntBASIC13.63□□□□□ -0.23
H3f3cP02301 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
H3f3cP02301 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.63□□□□□ -0.23
H3f3cP02301 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
H3f3cP02301 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3f3cP02301 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms