Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pdlim3O70209 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdlim3O70209 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.44□□□□□ -0.1
Pdlim3O70209 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdlim3O70209 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Pdlim3O70209 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Gm13474-201ENSMUST00000122466 815 ntBASIC14.43□□□□□ -0.1
Pdlim3O70209 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Mir5122-201ENSMUST00000175004 89 ntBASIC14.43□□□□□ -0.1
Pdlim3O70209 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim3O70209 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Pdlim3O70209 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pdlim3O70209 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pdlim3O70209 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.42□□□□□ -0.1
Pdlim3O70209 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.42□□□□□ -0.1
Pdlim3O70209 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Gm10566-201ENSMUST00000086739 996 ntBASIC14.42□□□□□ -0.1
Pdlim3O70209 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Pdlim3O70209 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pdlim3O70209 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pdlim3O70209 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Pdlim3O70209 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pdlim3O70209 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim3O70209 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Pdlim3O70209 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pdlim3O70209 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim3O70209 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pdlim3O70209 Gm16061-201ENSMUST00000122167 857 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms