Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cxcl13O55038 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Cxcl13O55038 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.41□□□□□ -0.26
Cxcl13O55038 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cxcl13O55038 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.41□□□□□ -0.26
Cxcl13O55038 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.41□□□□□ -0.26
Cxcl13O55038 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.41□□□□□ -0.26
Cxcl13O55038 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cxcl13O55038 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.41□□□□□ -0.26
Cxcl13O55038 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cxcl13O55038 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Cxcl13O55038 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.41□□□□□ -0.26
Cxcl13O55038 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Gm14140-201ENSMUST00000119999 995 ntBASIC13.4□□□□□ -0.26
Cxcl13O55038 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
Cxcl13O55038 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.4□□□□□ -0.26
Cxcl13O55038 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cxcl13O55038 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Cxcl13O55038 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cxcl13O55038 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cxcl13O55038 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cxcl13O55038 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cxcl13O55038 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Cxcl13O55038 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Gm11764-201ENSMUST00000120221 623 ntBASIC13.39□□□□□ -0.27
Cxcl13O55038 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.39□□□□□ -0.27
Cxcl13O55038 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.39□□□□□ -0.27
Cxcl13O55038 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.39□□□□□ -0.27
Cxcl13O55038 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cxcl13O55038 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cxcl13O55038 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms