Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Gm9396-201ENSMUST00000076703 567 ntBASIC20.35■□□□□ 0.85
Cntnap1O54991 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cntnap1O54991 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cntnap1O54991 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cntnap1O54991 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cntnap1O54991 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cntnap1O54991 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.35■□□□□ 0.85
Cntnap1O54991 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cntnap1O54991 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cntnap1O54991 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cntnap1O54991 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Cntnap1O54991 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cntnap1O54991 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 AC238811.1-201ENSMUST00000225302 441 ntBASIC20.34■□□□□ 0.85
Cntnap1O54991 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.34■□□□□ 0.85
Cntnap1O54991 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap1O54991 Gm15823-201ENSMUST00000064305 670 ntBASIC20.34■□□□□ 0.85
Cntnap1O54991 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Cntnap1O54991 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cntnap1O54991 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cntnap1O54991 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cntnap1O54991 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cntnap1O54991 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cntnap1O54991 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cntnap1O54991 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cntnap1O54991 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cntnap1O54991 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Cntnap1O54991 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cntnap1O54991 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC20.33■□□□□ 0.84
Cntnap1O54991 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.32■□□□□ 0.84
Cntnap1O54991 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.32■□□□□ 0.84
Cntnap1O54991 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cntnap1O54991 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cntnap1O54991 AC131068.2-201ENSMUST00000226175 1453 ntBASIC20.32■□□□□ 0.84
Cntnap1O54991 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.32■□□□□ 0.84
Cntnap1O54991 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC20.32■□□□□ 0.84
Cntnap1O54991 Gm45195-201ENSMUST00000205597 1008 ntBASIC20.32■□□□□ 0.84
Cntnap1O54991 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cntnap1O54991 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Cntnap1O54991 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap1O54991 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.31■□□□□ 0.84
Cntnap1O54991 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap1O54991 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap1O54991 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap1O54991 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap1O54991 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cntnap1O54991 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap1O54991 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap1O54991 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap1O54991 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC20.31■□□□□ 0.84
Cntnap1O54991 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap1O54991 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap1O54991 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap1O54991 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC20.31■□□□□ 0.84
Cntnap1O54991 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cntnap1O54991 Ldb3-207ENSMUST00000227819 1499 ntBASIC20.3■□□□□ 0.84
Cntnap1O54991 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cntnap1O54991 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Cntnap1O54991 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cntnap1O54991 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cntnap1O54991 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cntnap1O54991 Gm4204-201ENSMUST00000110798 1231 ntBASIC20.3■□□□□ 0.84
Cntnap1O54991 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cntnap1O54991 Gm42612-201ENSMUST00000197986 623 ntBASIC20.3■□□□□ 0.84
Cntnap1O54991 Gm43170-201ENSMUST00000199827 612 ntBASIC20.3■□□□□ 0.84
Cntnap1O54991 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cntnap1O54991 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cntnap1O54991 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cntnap1O54991 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cntnap1O54991 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms