Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.48■□□□□ 0.39
Prom1O54990 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Prom1O54990 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.48■□□□□ 0.39
Prom1O54990 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Prom1O54990 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Prom1O54990 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Prom1O54990 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.47■□□□□ 0.39
Prom1O54990 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Prom1O54990 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.47■□□□□ 0.39
Prom1O54990 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.47■□□□□ 0.39
Prom1O54990 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Prom1O54990 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.47■□□□□ 0.39
Prom1O54990 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.47■□□□□ 0.39
Prom1O54990 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Prom1O54990 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.47■□□□□ 0.39
Prom1O54990 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Prom1O54990 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Prom1O54990 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Prom1O54990 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.47■□□□□ 0.39
Prom1O54990 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prom1O54990 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
Prom1O54990 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Prom1O54990 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.46■□□□□ 0.39
Prom1O54990 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.46■□□□□ 0.39
Prom1O54990 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Prom1O54990 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.46■□□□□ 0.39
Prom1O54990 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Prom1O54990 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prom1O54990 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prom1O54990 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prom1O54990 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prom1O54990 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Prom1O54990 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Prom1O54990 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prom1O54990 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prom1O54990 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prom1O54990 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Prom1O54990 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prom1O54990 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.44■□□□□ 0.38
Prom1O54990 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.44■□□□□ 0.38
Prom1O54990 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Auts2-212ENSMUST00000178555 309 ntBASIC17.44■□□□□ 0.38
Prom1O54990 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.44■□□□□ 0.38
Prom1O54990 Gm10576-201ENSMUST00000191927 825 ntBASIC17.44■□□□□ 0.38
Prom1O54990 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms