Protein–RNA interactions for Protein: O54951

Sema6b, Semaphorin-6B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema6bO54951 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC20.47■□□□□ 0.87
Sema6bO54951 Gm45331-201ENSMUST00000209868 554 ntBASIC20.47■□□□□ 0.87
Sema6bO54951 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema6bO54951 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema6bO54951 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
Sema6bO54951 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Sema6bO54951 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Sema6bO54951 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sema6bO54951 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Sema6bO54951 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema6bO54951 Gm18737-201ENSMUST00000173594 937 ntBASIC20.46■□□□□ 0.87
Sema6bO54951 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC20.46■□□□□ 0.87
Sema6bO54951 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC20.46■□□□□ 0.87
Sema6bO54951 Gm18766-201ENSMUST00000189811 808 ntBASIC20.46■□□□□ 0.87
Sema6bO54951 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC20.46■□□□□ 0.87
Sema6bO54951 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC20.46■□□□□ 0.87
Sema6bO54951 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC20.46■□□□□ 0.87
Sema6bO54951 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sema6bO54951 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Sema6bO54951 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema6bO54951 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sema6bO54951 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema6bO54951 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema6bO54951 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sema6bO54951 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Sema6bO54951 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema6bO54951 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.45■□□□□ 0.86
Sema6bO54951 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.45■□□□□ 0.86
Sema6bO54951 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.45■□□□□ 0.86
Sema6bO54951 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema6bO54951 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Sema6bO54951 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema6bO54951 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema6bO54951 Gm6539-201ENSMUST00000119157 1064 ntBASIC20.45■□□□□ 0.86
Sema6bO54951 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC20.45■□□□□ 0.86
Sema6bO54951 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC20.45■□□□□ 0.86
Sema6bO54951 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC20.45■□□□□ 0.86
Sema6bO54951 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Sema6bO54951 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema6bO54951 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Sema6bO54951 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema6bO54951 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema6bO54951 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema6bO54951 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema6bO54951 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema6bO54951 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sema6bO54951 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema6bO54951 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema6bO54951 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC20.44■□□□□ 0.86
Sema6bO54951 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC20.44■□□□□ 0.86
Sema6bO54951 Gm11425-201ENSMUST00000119608 498 ntBASIC20.44■□□□□ 0.86
Sema6bO54951 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC20.44■□□□□ 0.86
Sema6bO54951 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema6bO54951 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Sema6bO54951 Gm8116-201ENSMUST00000182917 1201 ntBASIC20.44■□□□□ 0.86
Sema6bO54951 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC20.44■□□□□ 0.86
Sema6bO54951 Gm9396-201ENSMUST00000076703 567 ntBASIC20.44■□□□□ 0.86
Sema6bO54951 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema6bO54951 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema6bO54951 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sema6bO54951 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Sema6bO54951 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sema6bO54951 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema6bO54951 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sema6bO54951 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.43■□□□□ 0.86
Sema6bO54951 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema6bO54951 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC20.43■□□□□ 0.86
Sema6bO54951 Gm11543-201ENSMUST00000120758 370 ntBASIC20.43■□□□□ 0.86
Sema6bO54951 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sema6bO54951 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sema6bO54951 Gm18049-201ENSMUST00000208909 581 ntBASIC20.43■□□□□ 0.86
Sema6bO54951 Gm45668-201ENSMUST00000211271 493 ntBASIC20.43■□□□□ 0.86
Sema6bO54951 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema6bO54951 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Sema6bO54951 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.43■□□□□ 0.86
Sema6bO54951 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema6bO54951 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sema6bO54951 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sema6bO54951 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Sema6bO54951 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema6bO54951 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.42■□□□□ 0.86
Sema6bO54951 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sema6bO54951 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema6bO54951 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Sema6bO54951 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Sema6bO54951 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC20.42■□□□□ 0.86
Sema6bO54951 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC20.42■□□□□ 0.86
Sema6bO54951 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema6bO54951 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sema6bO54951 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.42■□□□□ 0.86
Sema6bO54951 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema6bO54951 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sema6bO54951 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC20.41■□□□□ 0.86
Sema6bO54951 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Sema6bO54951 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema6bO54951 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sema6bO54951 AC166349.1-201ENSMUST00000220866 695 ntBASIC20.41■□□□□ 0.86
Sema6bO54951 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema6bO54951 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema6bO54951 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms