Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Per2O54943 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Per2O54943 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Per2O54943 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Per2O54943 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.58■□□□□ 0.25
Per2O54943 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Per2O54943 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Per2O54943 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Per2O54943 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Per2O54943 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.58■□□□□ 0.24
Per2O54943 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Per2O54943 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Per2O54943 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Per2O54943 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Per2O54943 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Per2O54943 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.58■□□□□ 0.24
Per2O54943 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Per2O54943 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Per2O54943 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Per2O54943 Prob1-201ENSMUST00000097619 3021 ntBASIC16.58■□□□□ 0.24
Per2O54943 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Per2O54943 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Per2O54943 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.58■□□□□ 0.24
Per2O54943 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Per2O54943 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.57■□□□□ 0.24
Per2O54943 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.57■□□□□ 0.24
Per2O54943 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Per2O54943 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Per2O54943 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.57■□□□□ 0.24
Per2O54943 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Per2O54943 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 Mir6404-201ENSMUST00000183699 94 ntBASIC16.57■□□□□ 0.24
Per2O54943 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Per2O54943 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Per2O54943 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.57■□□□□ 0.24
Per2O54943 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Per2O54943 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Per2O54943 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Per2O54943 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.56■□□□□ 0.24
Per2O54943 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.56■□□□□ 0.24
Per2O54943 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Per2O54943 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.56■□□□□ 0.24
Per2O54943 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Per2O54943 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
Per2O54943 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Per2O54943 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Per2O54943 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Per2O54943 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Per2O54943 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Per2O54943 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Per2O54943 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Per2O54943 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Per2O54943 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms