Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.92■□□□□ 0.62
Smarce1O54941 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 Gm43799-201ENSMUST00000201845 579 ntBASIC18.92■□□□□ 0.62
Smarce1O54941 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
Smarce1O54941 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Smarce1O54941 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarce1O54941 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Smarce1O54941 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.91■□□□□ 0.62
Smarce1O54941 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Gm11355-201ENSMUST00000121120 306 ntBASIC18.91■□□□□ 0.62
Smarce1O54941 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarce1O54941 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarce1O54941 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarce1O54941 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Smarce1O54941 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Smarce1O54941 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarce1O54941 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Smarce1O54941 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarce1O54941 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Smarce1O54941 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Smarce1O54941 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Smarce1O54941 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Smarce1O54941 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.9■□□□□ 0.62
Smarce1O54941 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Smarce1O54941 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Smarce1O54941 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Smarce1O54941 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarce1O54941 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.9■□□□□ 0.62
Smarce1O54941 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Smarce1O54941 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarce1O54941 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarce1O54941 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarce1O54941 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarce1O54941 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarce1O54941 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Smarce1O54941 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Smarce1O54941 Gm18101-201ENSMUST00000215769 548 ntBASIC18.89■□□□□ 0.61
Smarce1O54941 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.89■□□□□ 0.61
Smarce1O54941 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarce1O54941 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarce1O54941 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarce1O54941 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarce1O54941 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.89■□□□□ 0.61
Smarce1O54941 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Smarce1O54941 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Smarce1O54941 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarce1O54941 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarce1O54941 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarce1O54941 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarce1O54941 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Smarce1O54941 Gm22697-201ENSMUST00000175194 63 ntBASIC18.88■□□□□ 0.61
Smarce1O54941 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.88■□□□□ 0.61
Smarce1O54941 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarce1O54941 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarce1O54941 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.88■□□□□ 0.61
Smarce1O54941 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarce1O54941 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarce1O54941 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smarce1O54941 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms