Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Abca4O35600 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Abca4O35600 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Abca4O35600 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Syt7-204ENSMUST00000223586 1344 ntBASIC14.85□□□□□ -0.03
Abca4O35600 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.85□□□□□ -0.03
Abca4O35600 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Abca4O35600 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Gm15321-201ENSMUST00000121290 288 ntBASIC14.85□□□□□ -0.03
Abca4O35600 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Abca4O35600 Gm28630-201ENSMUST00000187806 498 ntBASIC14.85□□□□□ -0.03
Abca4O35600 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.85□□□□□ -0.03
Abca4O35600 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Abca4O35600 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Abca4O35600 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Abca4O35600 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Abca4O35600 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.85□□□□□ -0.03
Abca4O35600 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.85□□□□□ -0.03
Abca4O35600 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Abca4O35600 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca4O35600 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Gm24694-201ENSMUST00000180054 110 ntBASIC14.84□□□□□ -0.03
Abca4O35600 Gm27663-201ENSMUST00000184839 110 ntBASIC14.84□□□□□ -0.03
Abca4O35600 Gm29667-201ENSMUST00000190817 490 ntBASIC14.84□□□□□ -0.03
Abca4O35600 Gm18018-201ENSMUST00000198273 408 ntBASIC14.84□□□□□ -0.03
Abca4O35600 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.84□□□□□ -0.03
Abca4O35600 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Abca4O35600 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Abca4O35600 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.84□□□□□ -0.03
Abca4O35600 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.84□□□□□ -0.03
Abca4O35600 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Abca4O35600 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca4O35600 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Abca4O35600 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.84□□□□□ -0.03
Abca4O35600 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Abca4O35600 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Abca4O35600 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Abca4O35600 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Abca4O35600 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.83□□□□□ -0.03
Abca4O35600 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca4O35600 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Abca4O35600 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca4O35600 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Abca4O35600 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca4O35600 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Abca4O35600 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Abca4O35600 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Abca4O35600 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Abca4O35600 Gm18827-201ENSMUST00000188341 790 ntBASIC14.83□□□□□ -0.04
Abca4O35600 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.83□□□□□ -0.04
Abca4O35600 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.83□□□□□ -0.04
Abca4O35600 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca4O35600 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Abca4O35600 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Abca4O35600 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Abca4O35600 Gm22189-201ENSMUST00000103822 86 ntBASIC14.82□□□□□ -0.04
Abca4O35600 Gm13015-201ENSMUST00000118674 204 ntBASIC14.82□□□□□ -0.04
Abca4O35600 Gm14767-201ENSMUST00000121559 586 ntBASIC14.82□□□□□ -0.04
Abca4O35600 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Abca4O35600 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Abca4O35600 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.82□□□□□ -0.04
Abca4O35600 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca4O35600 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca4O35600 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Abca4O35600 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca4O35600 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.82□□□□□ -0.04
Abca4O35600 Gm2272-201ENSMUST00000194903 582 ntBASIC14.82□□□□□ -0.04
Abca4O35600 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Abca4O35600 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca4O35600 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca4O35600 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca4O35600 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca4O35600 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca4O35600 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca4O35600 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Abca4O35600 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms